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Former Graduate Students

 
Clint W. Abner, Ph.D.
 
Education
B.S. in Microbiology with a minor in Chemistry, University of Arkansas
Ph.D. in Biochemistry and Molecular Biology, University of Florida

Publications
Vallur, A. C., Feller, J. A., Abner, C. W., Tran, R. K. and Bloom, L. B. (2002) Effects of hydrogen bonding within a damaged base pair on the activity of wild type and DNA-intercalating mutants of human alkyladenine DNA glycosylase. J. Biol. Chem. 277, 31673-31678.
Abner, C. W., Lau, A. Y., Ellenberger, T., and Bloom, L. B. (2001) Base excision and DNA binding activities of human alkyladenine DNA glycosylase are sensitive to the base paired with a lesion. J. Biol. Chem. 276, 13379-13387.

Left the Bloom Lab for:
a postdoctoral position at St. Jude Children's Research Hospital in the laboroatory of Peter McKinnon.



 
Stephen G. Anderson, Ph.D.
 
Education
B.S. in Molecular Biology and Microbiology, University of Central Florida
Ph. D. in Medical Sciences, Biochemistry & Molecular Biology, University of Florida

Publications
Anderson, S.G., Williams, C.R., O'Donnell, M. and Bloom, L.B. (2007) A function for the psi subunit in loading the Escherichia coli DNA polymerase sliding clamp. J. Biol. Chem. 282, 7035-7045.

Left the Bloom Lab for:
a postdoctoral position at the University of Florida in the laboratory of Scott Grieshaber.



 
Brandon Ason, Ph.D.
 
Education
B.S. in Genetics, University of Georgia
M.S. in Chemistry & Biochemistry, Arizona State University
Ph.D. in Biochemistry, University of Wisconsin, Madison

Publications
Ason, B., Handayani, R., Williams, C.R., Bertram, J.G., Hingorani, M.M, O'Donnell, M., Goodman, M.F, and Bloom, L.B. (2003) Mechanism of loading the Escherichia coli DNA polymerase III beta sliding clamp on DNA: Bona fide primer/templates preferentially trigger the gamma complex to hydrolyze ATP and load the clamp. J. Biol. Chem. 278, 10033-10040.
Ason, B., Bertram, J.G., Hingorani, M.M., Beechem, J.M., O'Donnell, M., Goodman, M.F., and Bloom, L.B. (2000) A model for Escherichia coli DNA polymerase III holoenzyme assembly at primer/template ends: DNA triggers a change in binding specificity of the gamma complex clamp loader. J. Biol. Chem. 275, 3006-3015.

Left the Bloom Lab for:
the Ph. D. program at the University of Wisconsin, Madison, in the laboratory of William Reznikoff.



 
Robyn L. Maher, Ph.D.
 
Education
B.S. in Biochemistry & Molecular Biology, The Pennsylvannia State University
Ph. D. in Medical Sciences, Biochemistry & Molecular Biology, University of Florida

Publications
Maher, R.L. and Bloom, L.B. (2007) Pre-steady-state kinetic characterization of the AP endonuclease activity of human AP endonuclease 1. J. Biol. Chem. 282, 30,577-30,585.
Maher, R.L., Vallur, A.C., Feller, J.A. and Bloom, L.B. (2006) Slow base excision by human alkyladenine DNA glycosylase limits the rate of formation of AP sites and AP endonuclease 1 does not stimulate base excision. DNA Repair 6, 71-81.
Vallur, A.C., Maher, R.L. and Bloom, L.B. (2005) The efficiency of hypoxanthine excision by alkyladenine DNA glycosylase is altered by changes in nearest neighbor bases. DNA Repair 4, 1088-1098.

Left the Bloom Lab for:
a postdoctoral position at the University of Vermont in the laboratory of Scott Morrical.



 
Ryan W. Shaw, Ph.D.
 
Education
B.S. in Chemistry/Biochemistry, Ohio University
Ph. D. in Biochemistry & Molecular Biology, University of Florida
 
Publications
Shaw, R.W., Feller, J.A., and Bloom, L.B. (2004) Contribution of a conserved phenylalanine residue to the activity of Escherichia coli uracil DNA glycosylase. DNA Repair 3, 1273-1283.

Left the Bloom Lab for:
a postdoctoral position at the University of Florida in the laboratory of Steven Benner.



 
Aarthy C. Vallur, Ph.D.
 
Education
B.S. in Nutrition and Dietetics, SR College, Trichy, TN, India
M.S. in Biochemistry and Molecular Biology, University of Madras, Chennai, TN, India
Ph. D. in Medical Sciences, Biochemistry & Molecular Biology, University of Florida

Publications
Maher, R.L., Vallur, A.C., Feller, J.A. and Bloom, L.B. (2006) Slow base excision by human alkyladenine DNA glycosylase limits the rate of formation of AP sites and AP endonuclease 1 does not stimulate base excision. DNA Repair 6, 71-81.
Vallur, A.C., Maher, R.L. and Bloom, L.B. (2005) The efficiency of hypoxanthine excision by alkyladenine DNA glycosylase is altered by changes in nearest neighbor bases. DNA Repair 4, 1088-1098.
Vallur, A. C., Feller, J. A., Abner, C. W., Tran, R. K. and Bloom, L. B. (2002) Effects of hydrogen bonding within a damaged base pair on the activity of wild type and DNA-intercalating mutants of human alkyladenine DNA glycosylase. J. Biol. Chem. 277, 31673-31678.

Left the Bloom Lab for:
a postdoctoral position at the University of Washington in the laboratory of Nancy Maizels.



 
Christopher R. Williams, Ph.D.
 
Education
B.S. in Biotechnology, William Paterson University, NJ
Ph. D. in Biochemistry & Molecular Biology, University of Florida
 
Publications
Anderson, S.G., Williams, C.R., O'Donnell, M. and Bloom, L.B. (2007) A function for the psi subunit in loading the Escherichia coli DNA polymerase sliding clamp. J. Biol. Chem. 282, 7035-7045.
Snyder, A.K., Williams, C.R., Johnson, A., O'Donnell, M. and Bloom, L.B. (2004) Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp. II. Uncoupling the beta and DNA binding activities of the gamma complex. J. Biol. Chem. 279, 4386-4393.
Williams, C.R., Snyder, A.K., Kuzmic, P., O'Donnell, M. and Bloom, L.B. (2004) Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp. I. Two distinct activities for individual ATP sites in the gamma complex. J. Biol. Chem. 279, 4376-4385.
Ason, B., Handayani, R., Williams, C.R., Bertram, J.G., Hingorani, M.M, O'Donnell, M., Goodman, M.F, and Bloom, L.B. (2003) Mechanism of loading the Escherichia coli DNA polymerase III beta sliding clamp on DNA: Bona fide primer/templates preferentially trigger the gamma complex to hydrolyze ATP and load the clamp. J. Biol. Chem. 278, 10033-10040.
 
Left the Bloom Lab for:
a postdoctoral position at Purdue University in the laboratory of Peixuan Guo.